Hi Hern��n,

Can you send me privately some data that I can try?
If you want to do some modeling, I would suggest to use Moose and use Roassal for the visualization.
We can do a pair programming session on this if you wish. My Skype id is alexandre.bergel

Cheers,
Alexandre

On Dec 26, 2013, at 9:48 PM, Hern��n Morales Durand <hernan.morales@gmail.com> wrote:

> Hi Tudor,
> Thanks for the clarification.
> Can you comment or point a link for the mechanism to transform my data for Roassal? Because if you want to visualize big data like population or association studies input is sometimes millions of rows. Of course I am not asking you to write my parsers :)
>
> Cheers,
>
> Hern��n
>
>
>
>
> 2013/12/26 Tudor Girba <tudor@tudorgirba.com>
> Hi Hern��n,
>
> The input should be independent from the visualization engine. Roassal offers you a way of transforming your objects into a visualization and it should not be responsible for the input formats.
>
> Cheers,
> Doru
>
>
> On Thu, Dec 26, 2013 at 9:28 PM, Hern��n Morales Durand <hernan.morales@gmail.com> wrote:
> Hi Alexandre and Ricardo,
>
> I am glad to see your advances in Roassal visualization!
> I wonder which input formats do you plan to support?
>
> Your relation tower can be used to visualize the crossover percentages between haplotype blocks. For example, here are some Haplotypes drawings from Haploview (http://en.wikipedia.org/wiki/Haploview) which may interest you:
>
> http://www.jnsbm.org/viewimage.asp?img=JNatScBiolMed_2012_3_2_139_101887_f13.jpg
> from this paper
> http://www.jnsbm.org/temp/JNatScBiolMed32139-5367486_145434.pdf
>
> http://www.mailund.dk/wp-content/uploads/2010/04/haplotypes.png
> http://www.mailund.dk/wp-content/uploads/2010/04/journal.pone_.0010207.g005.png
>
> I can send you the exported haplotypes from a study if you are interested. It contains 131 blocks which is somewhat big to attach to this list. The only problem I see is that a parser is needed to parse the Haplotype text output file, although the format should not be difficult to parse.
>
> Cheers,
>
> Hern��n
>
>
>
>
>
>
>
> 2013/12/17 Alexandre Bergel <alexandre.bergel@me.com>
> Hi!
>
> A new builder for Roassal is coming��� The goal of Relation tower is to easily visualize relations between group of elements. We had the inspiration from the following website http://peoplemov.in/#!
>
> Here are some screenshots:
> https://www.facebook.com/media/set/?set=a.559114290841839.1073741837.340543479365589&type=3
>
> If you like these screenshots, then you know where the like button is :-)
>
> We will have this visualization on the web, thanks to our smooth and nice Pharo2Amber migration process.
>
> Any idea on how to extend/apply Relation tower? Any set of data you want us to play with? Your data?
> Feedback are very welcome!
>
> Cheers,
> Ricardo & Alexandre
>
> --
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> Alexandre Bergel ��http://www.bergel.eu
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>
>
>
>
>
>
> --
> www.tudorgirba.com
>
> "Every thing has its own flow"
>

--
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Alexandre Bergel ��http://www.bergel.eu
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